From 567a949d9eb82b4143a0328e4471e8b8cdf4fa48 Mon Sep 17 00:00:00 2001
From: Jeffrey Phillips Freeman <jeffrey.freeman@syncleus.com>
Date: Mon, 27 Oct 2014 23:43:11 -0400
Subject: [PATCH] Removed defunct modules and files.
DANN-4
---
.gitmodules | 5 -
build.xml | 307 ----------------------------------------
lib | 1 -
script/run-genetics.bat | 2 -
script/run-genetics.sh | 2 -
script/run.bat | 2 -
script/run.sh | 2 -
7 files changed, 321 deletions(-)
delete mode 100644 .gitmodules
delete mode 100644 build.xml
delete mode 160000 lib
delete mode 100644 script/run-genetics.bat
delete mode 100644 script/run-genetics.sh
delete mode 100644 script/run.bat
delete mode 100644 script/run.sh
diff --git a/.gitmodules b/.gitmodules
deleted file mode 100644
index 543ad05..0000000
--- a/.gitmodules
+++ /dev/null
@@ -1,5 +0,0 @@
-[submodule "lib"]
- path = lib
- url = http://gerrit.syncleus.com/dANN-examples-lib
- branch=master
-
diff --git a/build.xml b/build.xml
deleted file mode 100644
index 14314d3..0000000
--- a/build.xml
+++ /dev/null
@@ -1,307 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project name="dANN Examples" default="all" basedir=".">
-
- <path id="classpath.ant">
- <fileset dir="lib/ant" includes="**/*.jar"/>
- <fileset dir="lib" includes="dann.jar"/>
- <fileset dir="../java_dann/build/jar" includes="dann.jar"/>
- </path>
- <path id="classpath.build">
- <fileset dir="lib/build" includes="**/*.jar"/>
- <fileset dir="lib" includes="dann.jar"/>
- <fileset dir="../java_dann/build/jar" includes="dann.jar"/>
- </path>
- <path id="classpath.build.tests">
- <fileset dir="lib/build" includes="**/*.jar"/>
- <fileset dir="lib" includes="dann.jar"/>
- <fileset dir="../java_dann/build/jar" includes="dann.jar"/>
- <pathelement path="build/classes"/>
- </path>
- <path id="classpath.test">
- <fileset dir="lib/test" includes="**/*.jar"/>
- <fileset dir="lib" includes="dann.jar"/>
- <fileset dir="../java_dann/build/jar" includes="**/dann.jar"/>
- <fileset dir="build/jar" includes="dann_examples.jar"/>
- <fileset dir="build/jar" includes="dann_examples-tests.jar"/>
- </path>
- <path id="classpath.run">
- <fileset dir="lib/run" includes="**/*.jar"/>
- <fileset dir="lib" includes="dann.jar"/>
- <fileset dir="../java_dann/build/jar" includes="dann.jar"/>
- <fileset dir="build/jar" includes="dann_examples.jar"/>
- </path>
-
- <taskdef name="lint4j" classname="com.jutils.lint4j.ant.Lint4jAntTask">
- <classpath>
- <fileset dir="lib/ant/lint">
- <include name="**/*.jar"/>
- </fileset>
- </classpath>
- </taskdef>
- <taskdef name="findbugs" classname="edu.umd.cs.findbugs.anttask.FindBugsTask">
- <classpath>
- <fileset dir="lib/ant/findbugs">
- <include name="**/*.jar"/>
- </fileset>
- </classpath>
- </taskdef>
- <taskdef name="checkstyle" classname="com.puppycrawl.tools.checkstyle.CheckStyleTask">
- <classpath>
- <fileset dir="lib/ant/checkstyle">
- <include name="**/*.jar"/>
- </fileset>
- </classpath>
- </taskdef>
- <taskdef name="pmd" classname="net.sourceforge.pmd.ant.PMDTask">
- <classpath>
- <fileset dir="lib/ant/pmd">
- <include name="**/*.jar"/>
- </fileset>
- </classpath>
- </taskdef>
-
-
- <target name="clean" description="Cleans the build environment">
- <delete dir="build"/>
- </target>
-
-
- <target name="javadoc" description="Generate javadocs from code">
- <mkdir dir="build/javadoc"/>
- <delete includeemptydirs="true">
- <fileset dir="build/javadoc" includes="**/*"/>
- </delete>
- <javadoc Private="true" destdir="build/javadoc/" classpathref="classpath.build">
- <fileset dir="src/main/java/" includes="**/*.java"/>
- </javadoc>
- </target>
-
-
- <target name="lint" description="Perform lint checks">
- <mkdir dir="build/lint"/>
- <lint4j packages="com.syncleus.*" level="5">
- <sourcepath>
- <dirset dir="src/main/java">
- <include name="**/*.java" />
- </dirset>
- <pathelement path="src/main/java/" />
- <dirset dir="src/test/java">
- <include name="**/*.java" />
- </dirset>
- <pathelement path="src/testjava/" />
- </sourcepath>
- <classpath refid="classpath.build"/>
- <formatters>
- <formatter type="text" />
- <formatter type="xml" toFile="build/lint/all.xml"/>
- </formatters>
- </lint4j>
- </target>
-
-
- <target name="compile" description="compile class files">
- <mkdir dir="build/classes"/>
- <javac destdir="build/classes" classpathref="classpath.build" debug="true">
- <compilerarg value="-Xlint:deprecation"/>
- <!--compilerarg value="-Xlint:unchecked"/-->
- <src path="src/main/java"/>
- </javac>
- <copy file="src/main/resources/log4j.xml" todir="build/classes"/>
- <mkdir dir="build/jar"/>
- <manifestclasspath property="manifest.classpath" jarfile="./dann_examples.jar" maxParentLevels="100">
- <!-- TODO this isnt correct -->
- <classpath refid="classpath.run" />
- </manifestclasspath>
- <jar destfile="build/jar/dann_examples.jar" basedir="build/classes">
- <manifest>
- <attribute name="Main-Class" value="com.syncleus.dann.examples.Main"/>
- <attribute name="Class-Path" value="${manifest.classpath}"/>
- <attribute name="Product-Name" value="dANN"/>
- <attribute name="Package-Title" value="com.syncleus.dann"/>
- <attribute name="Package-Version" value="2.0"/>
- <attribute name="Specification-Title" value="An Artificial Intelligence library."/>
- <attribute name="Specification-Vendor" value="Syncleus, Inc."/>
- <attribute name="Specification-Version" value="2.0"/>
- <attribute name="Implementation-Title" value="An Artificial Intelligence library."/>
- <attribute name="Implementation-Vendor" value="Syncleus, Inc."/>
- <attribute name="Implementation-Vendor-Id" value="com.syncleus.dann"/>
- <attribute name="Implementation-Version" value="2.0"/>
- </manifest>
- </jar>
-
- <mkdir dir="build/tests/classes"/>
- <javac destdir="build/tests/classes" classpathref="classpath.build.tests" debug="true">
- <compilerarg value="-Xlint:deprecation"/>
- <!--compilerarg value="-Xlint:unchecked"/-->
- <src path="src/test/java"/>
- </javac>
- <copy file="src/main/resources/log4j.xml" todir="build/tests/classes"/>
- <mkdir dir="build/jar"/>
- <jar destfile="build/jar/dann_examples-tests.jar" basedir="build/tests/classes">
- <manifest>
- <attribute name="Main-Class" value="com.syncleus.dann.examples.Main"/>
- <attribute name="Class-Path" value="${manifest.classpath}"/>
- <attribute name="Product-Name" value="dANN"/>
- <attribute name="Package-Title" value="com.syncleus.dann"/>
- <attribute name="Package-Version" value="2.0"/>
- <attribute name="Specification-Title" value="An Artificial Intelligence library."/>
- <attribute name="Specification-Vendor" value="Syncleus, Inc."/>
- <attribute name="Specification-Version" value="2.0"/>
- <attribute name="Implementation-Title" value="An Artificial Intelligence library."/>
- <attribute name="Implementation-Vendor" value="Syncleus, Inc."/>
- <attribute name="Implementation-Vendor-Id" value="com.syncleus.dann"/>
- <attribute name="Implementation-Version" value="2.0"/>
- </manifest>
- </jar>
- </target>
-
-
- <target name="compile-warnings" description="compile class files and display all warnings">
- <mkdir dir="build/classes"/>
- <javac destdir="build/classes" classpathref="classpath.build" debug="true">
- <compilerarg value="-Xlint"/>
- <src path="src/main/java"/>
- </javac>
- <copy file="src/main/resources/log4j.xml" todir="build/classes"/>
- <mkdir dir="build/jar"/>
- <manifestclasspath property="manifest.classpath" jarfile="./dann_examples.jar" maxParentLevels="100">
- <classpath refid="classpath.run" />
- </manifestclasspath>
- <jar destfile="build/jar/dann_examples.jar" basedir="build/classes">
- <manifest>
- <attribute name="Main-Class" value="com.syncleus.dann.examples.Main"/>
- <attribute name="Class-Path" value="${manifest.classpath}"/>
- <attribute name="Product-Name" value="dANN"/>
- <attribute name="Package-Title" value="com.syncleus.dann"/>
- <attribute name="Package-Version" value="2.0"/>
- <attribute name="Specification-Title" value="An Artificial Intelligence library."/>
- <attribute name="Specification-Vendor" value="Syncleus, Inc."/>
- <attribute name="Specification-Version" value="2.0"/>
- <attribute name="Implementation-Title" value="An Artificial Intelligence library."/>
- <attribute name="Implementation-Vendor" value="Syncleus, Inc."/>
- <attribute name="Implementation-Vendor-Id" value="com.syncleus.dann"/>
- <attribute name="Implementation-Version" value="2.0"/>
- </manifest>
- </jar>
-
- <mkdir dir="build/tests/classes"/>
- <javac destdir="build/tests/classes" classpathref="classpath.build.tests" debug="true">
- <compilerarg value="-Xlint"/>
- <src path="src/test/java"/>
- </javac>
- <copy file="src/main/resources/log4j.xml" todir="build/tests/classes"/>
- <mkdir dir="build/jar"/>
- <jar destfile="build/jar/dann_examples-tests.jar" basedir="build/tests/classes">
- <manifest>
- <attribute name="Main-Class" value="com.syncleus.dann.examples.Main"/>
- <attribute name="Class-Path" value="${manifest.classpath}"/>
- <attribute name="Product-Name" value="dANN"/>
- <attribute name="Package-Title" value="com.syncleus.dann"/>
- <attribute name="Package-Version" value="2.0"/>
- <attribute name="Specification-Title" value="An Artificial Intelligence library."/>
- <attribute name="Specification-Vendor" value="Syncleus, Inc."/>
- <attribute name="Specification-Version" value="2.0"/>
- <attribute name="Implementation-Title" value="An Artificial Intelligence library."/>
- <attribute name="Implementation-Vendor" value="Syncleus, Inc."/>
- <attribute name="Implementation-Vendor-Id" value="com.syncleus.dann"/>
- <attribute name="Implementation-Version" value="2.0"/>
- </manifest>
- </jar>
- </target>
-
- <target name="all" description="clean, javadoc, then compile">
- <antcall target="clean"/>
- <antcall target="javadoc"/>
- <antcall target="compile"/>
- </target>
-
- <target name="run" description="run the application after it has been built">
- <java fork="true" classname="com.syncleus.dann.examples.Main">
- <jvmarg value="-Xmx512m" />
- <classpath refid="classpath.run"/>
- </java>
- </target>
-
- <!-- TODO remove this target as well as the code it runs -->
- <target name="run-tests" description="this is a temporary target that will be removed, tests some experimental code">
- <java fork="true" classname="com.syncleus.dann.examples.test.Test3d">
- <jvmarg value="-Xmx512m" />
- <classpath refid="classpath.test"/>
- </java>
- </target>
-
- <!-- TODO this shouldnt be netbeans specific -->
- <target name="profile" description="run the netbeans profiler on this application as it runs">
- <nbprofiledirect>
- <classpath>
- <path refid="classpath.run"/>
- <path location="build/jar/dann_examples.jar"/>
- </classpath>
- </nbprofiledirect>
- <java fork="true" classname="com.syncleus.dann.examples.Main">
- <jvmarg value="${profiler.info.jvmargs.agent}"/>
- <jvmarg value="-Xmx512m" />
- <classpath refid="classpath.run"/>
- </java>
- </target>
-
- <!-- TODO remove org.jDesktop.* as a dependency -->
- <target name="findbugs" description="run findbugs check on built jar writing output to a log file">
- <mkdir dir="build/findbugs"/>
- <findbugs home="lib/ant/findbugs/"
- output="xml"
- outputFile="build/findbugs/findbugs-report.xml" >
- <auxClasspath path="lib/run/java3d/j3dcore.jar"/>
- <auxClasspath path="lib/run/java3d/freehep/freehep-j3d.jar"/>
- <auxClasspath path="lib/run/java3d/j3dutils.jar"/>
- <auxClasspath path="lib/run/java3d/vecmath.jar"/>
- <auxClasspath path="lib/test/junit/junit-4.6.jar"/>
- <auxClasspath path="lib/test/junit/fest/fest-swing-1.2a2.jar"/>
- <auxClasspath path="lib/test/junit/fest/fest-reflect-1.1.jar"/>
- <auxClasspath path="lib/run/jaxb/jaxb2-basics-runtime-0.5.3.jar"/>
- <auxClasspath path="lib/run/log4j/log4j-1.2.15.jar"/>
- <auxClasspath path="../java_dann/build/jar/dann.jar"/>
- <sourcePath path="src/main/java/" />
- <sourcePath path="src/test/java/" />
- <class location="build/jar/dann_examples.jar" />
- </findbugs>
- </target>
-
- <target name="checkstyle" description="run checkstyle checks on the source code">
- <mkdir dir="build/checkstyle"/>
- <checkstyle config="src/main/resources/checks.xml" maxErrors="2147483647">
- <fileset dir="src/main/java" includes="**/*.java"/>
- <fileset dir="src/test/java" includes="**/*.java"/>
- <formatter type="plain"/>
- <formatter type="xml" toFile="build/checkstyle/checkstyle-report.xml"/>
- </checkstyle>
- </target>
-
- <target name="pmd" description="run pmd checks on the source code">
- <mkdir dir="build/pmd"/>
- <pmd rulesetfiles="src/main/resources/pmd.xml">
- <formatter type="xml" toFile="build/pmd/pmd-report.xml"/>
- <fileset dir="src/main/java/">
- <include name="**/*.java"/>
- </fileset>
- <fileset dir="src/test/java/">
- <include name="**/*.java"/>
- </fileset>
- </pmd>
- </target>
-
- <target name="tests" description="run all unit tests without generating coverage information">
- <mkdir dir="build/tests"/>
- <junit printsummary="yes" haltonfailure="no" showoutput="yes" >
- <classpath refid="classpath.test"/>
- <formatter type="xml"/>
- <batchtest fork="yes" todir="build/tests">
- <fileset dir="src/test/java">
- <include name="com/syncleus/**/Test*.java"/>
- <exclude name="**/AllTests.java"/>
- </fileset>
- </batchtest>
- </junit>
- </target>
-
-</project>
diff --git a/lib b/lib
deleted file mode 160000
index 221bcea..0000000
--- a/lib
+++ /dev/null
@@ -1 +0,0 @@
-Subproject commit 221bcea2c0ca0251de12487f794741e6733ee29c
diff --git a/script/run-genetics.bat b/script/run-genetics.bat
deleted file mode 100644
index 296128b..0000000
--- a/script/run-genetics.bat
+++ /dev/null
@@ -1,2 +0,0 @@
-java -Xmx128m -classpath ..\build\jar\dann_examples.jar;..\..\java_dann\build\jar\dann.jar;..\lib\freehep-j3d.jar;../lib/j3dcore.jar;../lib/vecmath.jar;../lib/j3dutils.jar;..\..\java_dann\lib\log4j-1.2.15.jar com.syncleus.dann.examples.test.Test3d
-@PAUSE
\ No newline at end of file
diff --git a/script/run-genetics.sh b/script/run-genetics.sh
deleted file mode 100644
index cfbeccf..0000000
--- a/script/run-genetics.sh
+++ /dev/null
@@ -1,2 +0,0 @@
-#!/bin/sh
-java -Xmx128m -classpath ../build/jar/dann_examples.jar:../../java_dann/build/jar/dann.jar:../lib/freehep-j3d.jar:../lib/j3dcore.jar:../lib/vecmath.jar:../lib/j3dutils.jar com.syncleus.dann.examples.test.Test3d
diff --git a/script/run.bat b/script/run.bat
deleted file mode 100644
index cebee80..0000000
--- a/script/run.bat
+++ /dev/null
@@ -1,2 +0,0 @@
-java -Xmx320m -classpath ..\build\jar\dann_examples.jar;..\..\java_dann\build\jar\dann.jar;../lib/j3dcore.jar;../lib/vecmath.jar;../lib/j3dutils.jar;..\..\java_dann\lib\log4j-1.2.15.jar com.syncleus.dann.examples.Main
-@PAUSE
\ No newline at end of file
diff --git a/script/run.sh b/script/run.sh
deleted file mode 100644
index 1ab1225..0000000
--- a/script/run.sh
+++ /dev/null
@@ -1,2 +0,0 @@
-#!/bin/sh
-java -Xmx320m -classpath ./target/dann-examples-2.0-SNAPSHOT.jar:../java_dann/target/dann-core-2.0-SNAPSHOT.jar:./lib/run/java3d/j3dcore.jar:./lib/run/java3d/vecmath.jar:./lib/run/java3d/j3dutils.jar:./lib/run/log4j/log4j-1.2.15.jar:./lib/run/jaxb/jaxb2-basics-runtime-0.5.3.jar com.syncleus.dann.examples.Main
--
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