diff --git a/src/main/java/com/syncleus/dann/attributes/hat/MutableAttributeTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/attributes/hat/MutableAttributeTreeAdjacencyGraph.java index f324ec86081bb45e38c5653f75cd90b8d5df8171..c006ecb95df3ec90ccfaec2aee3d04fe95dc6d37 100644 --- a/src/main/java/com/syncleus/dann/attributes/hat/MutableAttributeTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/attributes/hat/MutableAttributeTreeAdjacencyGraph.java @@ -20,6 +20,7 @@ package com.syncleus.dann.attributes.hat; import java.util.Set; import com.syncleus.dann.graph.DirectedEdge; +import com.syncleus.dann.graph.Graph; import com.syncleus.dann.graph.MutableTreeAdjacencyGraph; // TODO we need to handle clone and cloneAdd and similar methods differently since the nodes here must know which graph it belongs to @@ -59,49 +60,49 @@ public class MutableAttributeTreeAdjacencyGraph<N extends AbstractHierarchicalAt } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneAdd(final E newEdge) + public Graph<N, E> cloneAdd(final E newEdge) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneAdd(final N newNode) + public Graph<N, E> cloneAdd(final N newNode) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) + public Graph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneRemove(final E edgeToRemove) + public Graph<N, E> cloneRemove(final E edgeToRemove) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneRemove(final N nodeToRemove) + public Graph<N, E> cloneRemove(final N nodeToRemove) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) + public Graph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); } @Override - public MutableAttributeTreeAdjacencyGraph<N, E, T> clone() + public Object clone() { // TODO Fix this! throw new IllegalStateException("Operation not yet supported"); diff --git a/src/main/java/com/syncleus/dann/genetics/AbstractValueGene.java b/src/main/java/com/syncleus/dann/genetics/AbstractValueGene.java index 00f350ff3ec4fd6fd3d9826c6c28e743621093e8..ddf00c1da0b3d7eea60db5e069218cbd9a85713d 100644 --- a/src/main/java/com/syncleus/dann/genetics/AbstractValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/AbstractValueGene.java @@ -107,7 +107,7 @@ public abstract class AbstractValueGene<N extends MutableNumber> implements Valu */ @SuppressWarnings("unchecked") @Override - public AbstractValueGene clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/genetics/ByteValueGene.java b/src/main/java/com/syncleus/dann/genetics/ByteValueGene.java index 2520ea5ec8a4279d48f23033273edfa6b0d4f9a3..c9c6d3400438c0b9456a4e9e567aba6f4c44058d 100644 --- a/src/main/java/com/syncleus/dann/genetics/ByteValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/ByteValueGene.java @@ -83,18 +83,6 @@ public class ByteValueGene extends AbstractValueGene<MutableByte> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public ByteValueGene clone() - { - return (ByteValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class ByteValueGene extends AbstractValueGene<MutableByte> */ public ByteValueGene mutate(final double deviation) { - final ByteValueGene copy = this.clone(); + final ByteValueGene copy = (ByteValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/Chromatid.java b/src/main/java/com/syncleus/dann/genetics/Chromatid.java index 50b9e78426568fb2e2517d1c459ca15586a79805..bf1e627c64103c21cbb2a0e2d70a88413a3858e9 100644 --- a/src/main/java/com/syncleus/dann/genetics/Chromatid.java +++ b/src/main/java/com/syncleus/dann/genetics/Chromatid.java @@ -59,13 +59,4 @@ public interface Chromatid<G extends Gene> extends Cloneable * @since 2.0 */ void crossover(List<G> geneticSegment, int point); - /** - * All children of this class should override this method and return their own - * class type even if it is abstract. It should return a copy without any - * mutation. - * - * @return an exact copy of this object. - * @since 2.0 - */ - Chromatid<G> clone(); } diff --git a/src/main/java/com/syncleus/dann/genetics/DoubleValueGene.java b/src/main/java/com/syncleus/dann/genetics/DoubleValueGene.java index 78137ea9b93852667c2e72c5784e4de539efe7d2..548a1f9a3d4ee77b2ddaba436521cd9a21771f65 100644 --- a/src/main/java/com/syncleus/dann/genetics/DoubleValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/DoubleValueGene.java @@ -83,18 +83,6 @@ public class DoubleValueGene extends AbstractValueGene<MutableDouble> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public DoubleValueGene clone() - { - return (DoubleValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class DoubleValueGene extends AbstractValueGene<MutableDouble> */ public DoubleValueGene mutate(final double deviation) { - final DoubleValueGene copy = this.clone(); + final DoubleValueGene copy = (DoubleValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/FloatValueGene.java b/src/main/java/com/syncleus/dann/genetics/FloatValueGene.java index 0d90c280f3d1d86031f0f58ed116d6c6c350f845..b6c26af442d485028576171147d0878955361363 100644 --- a/src/main/java/com/syncleus/dann/genetics/FloatValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/FloatValueGene.java @@ -83,18 +83,6 @@ public class FloatValueGene extends AbstractValueGene<MutableFloat> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public FloatValueGene clone() - { - return (FloatValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class FloatValueGene extends AbstractValueGene<MutableFloat> */ public FloatValueGene mutate(final double deviation) { - final FloatValueGene copy = this.clone(); + final FloatValueGene copy = (FloatValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/Gene.java b/src/main/java/com/syncleus/dann/genetics/Gene.java index 9f11fa44b2e0aa61d0ca6464f4210b3f2481307d..ee074caedb894ce7325505ea771267dfa4f16a38 100644 --- a/src/main/java/com/syncleus/dann/genetics/Gene.java +++ b/src/main/java/com/syncleus/dann/genetics/Gene.java @@ -27,15 +27,6 @@ package com.syncleus.dann.genetics; */ public interface Gene extends Cloneable { - /** - * All children of this class should override this method and return their own - * class type even if it is abstract. It should return a copy without any - * mutation. - * - * @return an exact copy of this object. - * @since 2.0 - */ - Gene clone(); /** * The current expression activity. The meaning of this value depends on the * type of gene and the genetic system being used. diff --git a/src/main/java/com/syncleus/dann/genetics/GeneticAlgorithmChromosome.java b/src/main/java/com/syncleus/dann/genetics/GeneticAlgorithmChromosome.java index c31bc49820f9c460a2b08dca5a84706c3533dfee..af9628e3e3344e22477acea2f210f0a3af21cbfa 100644 --- a/src/main/java/com/syncleus/dann/genetics/GeneticAlgorithmChromosome.java +++ b/src/main/java/com/syncleus/dann/genetics/GeneticAlgorithmChromosome.java @@ -153,7 +153,7 @@ public class GeneticAlgorithmChromosome implements Chromatid<AbstractValueGene>, * @since 2.0 */ @Override - public GeneticAlgorithmChromosome clone() + public Object clone() { try { @@ -181,7 +181,7 @@ public class GeneticAlgorithmChromosome implements Chromatid<AbstractValueGene>, */ public GeneticAlgorithmChromosome mutate(final double deviation) { - final GeneticAlgorithmChromosome mutated = this.clone(); + final GeneticAlgorithmChromosome mutated = (GeneticAlgorithmChromosome) this.clone(); mutated.alleles.clear(); for(final AbstractValueGene allele : this.alleles) mutated.alleles.add(allele.mutate(deviation)); diff --git a/src/main/java/com/syncleus/dann/genetics/IntegerValueGene.java b/src/main/java/com/syncleus/dann/genetics/IntegerValueGene.java index 7b0c7216e55c0399116c30fafca57ef37cafc699..aa25e1806f07d351db22de05fe17b8a69af734bd 100644 --- a/src/main/java/com/syncleus/dann/genetics/IntegerValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/IntegerValueGene.java @@ -83,18 +83,6 @@ public class IntegerValueGene extends AbstractValueGene<MutableInteger> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public IntegerValueGene clone() - { - return (IntegerValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class IntegerValueGene extends AbstractValueGene<MutableInteger> */ public IntegerValueGene mutate(final double deviation) { - final IntegerValueGene copy = this.clone(); + final IntegerValueGene copy = (IntegerValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/LongValueGene.java b/src/main/java/com/syncleus/dann/genetics/LongValueGene.java index d9fb2fc65e3375af21dc878507f2b391111df41a..4fb87927261d5a8814e2245b53388e1cd7d507cd 100644 --- a/src/main/java/com/syncleus/dann/genetics/LongValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/LongValueGene.java @@ -83,18 +83,6 @@ public class LongValueGene extends AbstractValueGene<MutableLong> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public LongValueGene clone() - { - return (LongValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class LongValueGene extends AbstractValueGene<MutableLong> */ public LongValueGene mutate(final double deviation) { - final LongValueGene copy = this.clone(); + final LongValueGene copy = (LongValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/MutableByte.java b/src/main/java/com/syncleus/dann/genetics/MutableByte.java index b031eddcae3a8dbe2f14f9513ae502a92e4dea33..6cc08b758921e58a9a16bcb85bc9de720afbf0da 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableByte.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableByte.java @@ -64,18 +64,6 @@ public class MutableByte extends MutableNumber<Byte> implements Comparable<Mutab super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableByte clone() - { - return (MutableByte) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/MutableDouble.java b/src/main/java/com/syncleus/dann/genetics/MutableDouble.java index a45d41fb05329d5b16257c32430cec2fbb1d3706..8725647a3667c8d8fefcd339617d2dad1acba2aa 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableDouble.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableDouble.java @@ -64,18 +64,6 @@ public class MutableDouble extends MutableNumber<Double> implements Comparable<M super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableDouble clone() - { - return (MutableDouble) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/MutableFloat.java b/src/main/java/com/syncleus/dann/genetics/MutableFloat.java index 43d4aad1157be80287630f1a2c9c7c6900411cfd..a3c0dfea9f79a2efae676476c86d2d8b540471eb 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableFloat.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableFloat.java @@ -64,18 +64,6 @@ public class MutableFloat extends MutableNumber<Float> implements Comparable<Mut super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableFloat clone() - { - return (MutableFloat) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/MutableInteger.java b/src/main/java/com/syncleus/dann/genetics/MutableInteger.java index 718c9f85d876c406da585c034036d24e0761e7ca..c110f3fedd756afbe53e7ed45d824a478a3768da 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableInteger.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableInteger.java @@ -64,18 +64,6 @@ public class MutableInteger extends MutableNumber<Integer> implements Comparable super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableInteger clone() - { - return (MutableInteger) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/MutableLong.java b/src/main/java/com/syncleus/dann/genetics/MutableLong.java index e104256674a1875c3ab86c3fc4bd76ba684b5bb1..9d12b498c2f0907583821eadba89981bfed334c3 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableLong.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableLong.java @@ -64,18 +64,6 @@ public class MutableLong extends MutableNumber<Long> implements Comparable<Mutab super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableLong clone() - { - return (MutableLong) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/MutableNumber.java b/src/main/java/com/syncleus/dann/genetics/MutableNumber.java index 89b525f30a6faa9f665499dc74c92cc0d525e861..5dd13b6997405f16515bf2778572fc5333562db6 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableNumber.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableNumber.java @@ -202,7 +202,7 @@ public abstract class MutableNumber<N extends Number> extends Number implements */ @SuppressWarnings("unchecked") @Override - public MutableNumber<N> clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/genetics/MutableShort.java b/src/main/java/com/syncleus/dann/genetics/MutableShort.java index e21c0b1e9693af0feedc707fe5bb112484ea4d82..6be7776acb268f2cbc01c72994d1b5576961401d 100644 --- a/src/main/java/com/syncleus/dann/genetics/MutableShort.java +++ b/src/main/java/com/syncleus/dann/genetics/MutableShort.java @@ -64,18 +64,6 @@ public class MutableShort extends MutableNumber<Short> implements Comparable<Mut super(value); } - /** - * An new exact copy of this object with the same value. - * - * @return a new exact copy of this object with the same value. - * @since 2.0 - */ - @Override - public MutableShort clone() - { - return (MutableShort) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a * normal distribution multiplied by the deviation. If the Number is mutated diff --git a/src/main/java/com/syncleus/dann/genetics/ShortValueGene.java b/src/main/java/com/syncleus/dann/genetics/ShortValueGene.java index cb1f2e2cbf92f5b1455976f6163faa4d533cd5e3..70cc803430b049ed5835fa87377ace0c71a021ee 100644 --- a/src/main/java/com/syncleus/dann/genetics/ShortValueGene.java +++ b/src/main/java/com/syncleus/dann/genetics/ShortValueGene.java @@ -83,18 +83,6 @@ public class ShortValueGene extends AbstractValueGene<MutableShort> super(copyGene); } - /** - * Creates a new instance of this object that is an exact copy. - * - * @return an exact copy of this object. - * @since 2.0 - */ - @Override - public ShortValueGene clone() - { - return (ShortValueGene) super.clone(); - } - /** * This will make a copy of the object and mutate it. The mutation has a normal * distribution multiplied by the deviation. @@ -107,7 +95,7 @@ public class ShortValueGene extends AbstractValueGene<MutableShort> */ public ShortValueGene mutate(final double deviation) { - final ShortValueGene copy = this.clone(); + final ShortValueGene copy = (ShortValueGene) this.clone(); copy.internalMutate(deviation); return copy; diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractKey.java b/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractKey.java index 3e9c9eed09774889e295e74cb76db65e33a2d577..d0fdf75f52a3ba89c87b81ef728de88ebaf004e2 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractKey.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractKey.java @@ -128,7 +128,7 @@ public abstract class AbstractKey implements Cloneable } @Override - public AbstractKey clone() + public Object clone() { try { @@ -155,7 +155,7 @@ public abstract class AbstractKey implements Cloneable else newPoints.remove(point.getNumber()); - final AbstractKey copy = this.clone(); + final AbstractKey copy = (AbstractKey) this.clone(); copy.points = Collections.unmodifiableMap(newPoints); return copy; } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractWaveletGene.java b/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractWaveletGene.java index 19da90727861510c12e6a8e45400f03814919c99..ea7e98accfdf906150a403e21ac90fd3e671a9dc 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractWaveletGene.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/AbstractWaveletGene.java @@ -136,7 +136,7 @@ public abstract class AbstractWaveletGene implements Gene } @Override - public AbstractWaveletGene clone() + public Object clone() { try { @@ -144,7 +144,7 @@ public abstract class AbstractWaveletGene implements Gene copy.currentActivity = this.currentActivity; copy.pendingActivity = this.pendingActivity; - copy.expressionFunction = this.expressionFunction.clone(); + copy.expressionFunction = (ExpressionFunction) this.expressionFunction.clone(); copy.mutability = this.mutability; copy.receivingConcentrations = new HashSet<SignalKeyConcentration>(this.receivingConcentrations); diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/Chromosome.java b/src/main/java/com/syncleus/dann/genetics/wavelets/Chromosome.java index e48a3d8185cbaa985d272062e25ceaa9cf3fcdf2..4ffee246424dc1cbb2f4e91c0a8eeb8246b97ab4 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/Chromosome.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/Chromosome.java @@ -230,13 +230,13 @@ public class Chromosome implements Cloneable * @return A clone of a chromosome. */ @Override - public Chromosome clone() + public Object clone() { try { final Chromosome copy = (Chromosome) super.clone(); - copy.leftChromatid = this.leftChromatid.clone(); - copy.rightChromatid = this.rightChromatid.clone(); + copy.leftChromatid = (WaveletChromatid) this.leftChromatid.clone(); + copy.rightChromatid = (WaveletChromatid) this.rightChromatid.clone(); copy.mutability = this.mutability; return copy; } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/ExpressionFunction.java b/src/main/java/com/syncleus/dann/genetics/wavelets/ExpressionFunction.java index a92728fef1007c3aea7407f9bf5e1971227d89f7..2192d9c04449badc843dd89b0f6f6cd6a6cf93a5 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/ExpressionFunction.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/ExpressionFunction.java @@ -103,7 +103,7 @@ public class ExpressionFunction implements Cloneable public CombinedWaveletFunction getWavelet() { this.reconstructWavelet(); - return this.wavelet.clone(); + return (CombinedWaveletFunction) this.wavelet.clone(); } public boolean receives(final SignalKey signal) @@ -138,7 +138,7 @@ public class ExpressionFunction implements Cloneable } @Override - public ExpressionFunction clone() + public Object clone() { try { @@ -146,9 +146,9 @@ public class ExpressionFunction implements Cloneable copy.receptors = new HashSet<ReceptorKey>(this.receptors); final List<WaveMultidimensionalFunction> newWaves = new ArrayList<WaveMultidimensionalFunction>(); for(final WaveMultidimensionalFunction wave : this.waves) - newWaves.add(wave.clone()); + newWaves.add((WaveMultidimensionalFunction) wave.clone()); copy.waves = newWaves; - copy.wavelet = this.wavelet.clone(); + copy.wavelet = (CombinedWaveletFunction) this.wavelet.clone(); return copy; } catch(CloneNotSupportedException caught) @@ -182,7 +182,7 @@ public class ExpressionFunction implements Cloneable */ public ExpressionFunction mutate(final double deviation) { - final ExpressionFunction copy = this.clone(); + final ExpressionFunction copy = (ExpressionFunction) this.clone(); final double changePercentage = 0.1; while( RANDOM.nextFloat() < (float) changePercentage) { @@ -248,7 +248,7 @@ public class ExpressionFunction implements Cloneable */ public ExpressionFunction mutate(final double deviation, final ReceptorKey newReceptor) { - final ExpressionFunction copy = this.clone(); + final ExpressionFunction copy = (ExpressionFunction) this.clone(); copy.receptors.add(newReceptor); if( copy.receptors.size() > this.receptors.size() ) { diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/ExternalSignalGene.java b/src/main/java/com/syncleus/dann/genetics/wavelets/ExternalSignalGene.java index e9ef32b09f3970448cf94bad5917f90a331fa69d..1454ac565e0aeefb2169d72fb451ba9fc52b0974 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/ExternalSignalGene.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/ExternalSignalGene.java @@ -61,12 +61,6 @@ public class ExternalSignalGene extends SignalGene return this.outward; } - @Override - public ExternalSignalGene clone() - { - return (ExternalSignalGene) super.clone(); - } - @Override public void mutate(final Set<AbstractKey> keyPool) { diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/Nucleus.java b/src/main/java/com/syncleus/dann/genetics/wavelets/Nucleus.java index 3057a318c8e23e541b213a2f12cf9399244edaf8..5447dcd2cf0346ae2271ca437efc3221a89c0e0b 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/Nucleus.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/Nucleus.java @@ -99,14 +99,14 @@ public class Nucleus implements Cloneable } @Override - public Nucleus clone() + public Object clone() { try { final Nucleus copy = (Nucleus) super.clone(); copy.chromosomes = new ArrayList<Chromosome>(); for(final Chromosome chromosome : this.chromosomes) - copy.chromosomes.add(chromosome.clone()); + copy.chromosomes.add((Chromosome) chromosome.clone()); return copy; } catch(CloneNotSupportedException caught) diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/PromoterGene.java b/src/main/java/com/syncleus/dann/genetics/wavelets/PromoterGene.java index e9f087017303a4b2eef56b2d7e44eede502416c0..5d1c76f8ca719baeb611a8f2555bd3b03da9aec2 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/PromoterGene.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/PromoterGene.java @@ -45,11 +45,11 @@ public class PromoterGene extends AbstractWaveletGene } @Override - public PromoterGene clone() + public Object clone() { final PromoterGene copy = (PromoterGene) super.clone(); - copy.targetDistance = this.targetDistance.clone(); + copy.targetDistance = (MutableInteger) this.targetDistance.clone(); return copy; } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/ReceptorKey.java b/src/main/java/com/syncleus/dann/genetics/wavelets/ReceptorKey.java index 614753565565f8df03bc4d125a0c4c898ada8e68..94a50552d99852fbcb45d9a04f4f43b926232039 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/ReceptorKey.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/ReceptorKey.java @@ -77,16 +77,4 @@ public class ReceptorKey extends AbstractKey return false; } - - @Override - public ReceptorKey clone() - { - return (ReceptorKey) super.clone(); - } - - @Override - public ReceptorKey mutate(final double deviation) - { - return (ReceptorKey) super.mutate(deviation); - } } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalGene.java b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalGene.java index 7467b6fe070664a26103f1777e33bad4ebf9fd80..33adf452f3fb54160f9cbee9e1a752b67999ba55 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalGene.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalGene.java @@ -86,7 +86,7 @@ public class SignalGene extends AbstractWaveletGene } @Override - public SignalGene clone() + public Object clone() { final SignalGene copy = (SignalGene) super.clone(); copy.outputSignal = this.outputSignal; @@ -97,6 +97,6 @@ public class SignalGene extends AbstractWaveletGene public void mutate(final Set<AbstractKey> keyPool) { super.mutate(keyPool); - this.outputSignal = this.outputSignal.mutate(this.getMutability()); + this.outputSignal = (SignalKey) this.outputSignal.mutate(this.getMutability()); } } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalKey.java b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalKey.java index afe06ad5a3e4f31b8d7ed0a5e6ff62bedb2b2fee..4fc5296a4b7cfaff219316a1823cc348cb421a63 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalKey.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalKey.java @@ -41,16 +41,4 @@ public class SignalKey extends AbstractKey { super(keyString); } - - @Override - public SignalKey clone() - { - return (SignalKey) super.clone(); - } - - @Override - public SignalKey mutate(final double deviation) - { - return (SignalKey) super.mutate(deviation); - } } diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalProcessingWavelet.java b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalProcessingWavelet.java index 5a2a5ea78ec21500117f590894f9e289eb9071ed..05d203c016b174c719c4589fb3d3d12fb25c0948 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/SignalProcessingWavelet.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/SignalProcessingWavelet.java @@ -176,7 +176,7 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel public CombinedWaveletFunction getWavelet() { this.reconstructWavelet(); - return this.wavelet.clone(); + return (CombinedWaveletFunction) this.wavelet.clone(); } public void preTick() @@ -195,7 +195,7 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel } @Override - public SignalProcessingWavelet clone() + public Object clone() { try { @@ -203,9 +203,9 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel copy.signals = new TreeSet<SignalConcentration>(this.signals); final List<WaveMultidimensionalFunction> newWaves = new ArrayList<WaveMultidimensionalFunction>(); for(final WaveMultidimensionalFunction wave : this.waves) - newWaves.add(wave.clone()); + newWaves.add((WaveMultidimensionalFunction) wave.clone()); copy.waves = newWaves; - copy.wavelet = (this.wavelet == null ? null : this.wavelet.clone()); + copy.wavelet = (this.wavelet == null ? null : (CombinedWaveletFunction) this.wavelet.clone()); return copy; } catch(CloneNotSupportedException caught) @@ -246,7 +246,7 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel final double waveGenerationChance = 0.8; final double waveDeletionChance = 0.9; final double exitChance = 0.1; - final SignalProcessingWavelet copy = this.clone(); + final SignalProcessingWavelet copy = (SignalProcessingWavelet) this.clone(); copy.id = RANDOM.nextLong(); do { @@ -327,7 +327,7 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel { if( this.signals.contains(newSignal) ) return this.mutate(deviation); - final SignalProcessingWavelet copy = this.clone(); + final SignalProcessingWavelet copy = (SignalProcessingWavelet) this.clone(); copy.signals.add(newSignal); if( copy.signals.size() > this.signals.size() ) { @@ -436,7 +436,7 @@ public class SignalProcessingWavelet implements Comparable<SignalProcessingWavel final WaveMultidimensionalFunction[] wavesArray = new WaveMultidimensionalFunction[this.waves.size()]; this.waves.toArray(wavesArray); final WaveMultidimensionalFunction randomWave = wavesArray[RANDOM.nextInt(wavesArray.length)]; - final WaveMultidimensionalFunction newWave = randomWave.clone(); + final WaveMultidimensionalFunction newWave = (WaveMultidimensionalFunction) randomWave.clone(); // TODO clean this up final double changeProbability = 1.0; final double variableAdjustment = 2.0; diff --git a/src/main/java/com/syncleus/dann/genetics/wavelets/WaveletChromatid.java b/src/main/java/com/syncleus/dann/genetics/wavelets/WaveletChromatid.java index 49a322c59f11e24ab873020d5bad78fe1b735023..c3731abc790a4f6962340ca901cf0badc58c34f5 100644 --- a/src/main/java/com/syncleus/dann/genetics/wavelets/WaveletChromatid.java +++ b/src/main/java/com/syncleus/dann/genetics/wavelets/WaveletChromatid.java @@ -68,13 +68,13 @@ public class WaveletChromatid implements Chromatid<AbstractWaveletGene>, Cloneab this.externalSignalGenes = new ArrayList<ExternalSignalGene>(); for(final AbstractWaveletGene currentGene : copy.sequencedGenes) - this.sequencedGenes.add(currentGene.clone()); + this.sequencedGenes.add((AbstractWaveletGene) currentGene.clone()); for(final PromoterGene currentGene : copy.promoters) - this.promoters.add(currentGene.clone()); + this.promoters.add((PromoterGene) currentGene.clone()); for(final SignalGene currentGene : copy.localSignalGenes) - this.localSignalGenes.add(currentGene.clone()); + this.localSignalGenes.add((SignalGene) currentGene.clone()); for(final ExternalSignalGene currentGene : copy.externalSignalGenes) - this.externalSignalGenes.add(currentGene.clone()); + this.externalSignalGenes.add((ExternalSignalGene) currentGene.clone()); } public static WaveletChromatid newRandomWaveletChromatid() @@ -264,7 +264,7 @@ public class WaveletChromatid implements Chromatid<AbstractWaveletGene>, Cloneab } @Override - public WaveletChromatid clone() + public Object clone() { try { @@ -279,13 +279,13 @@ public class WaveletChromatid implements Chromatid<AbstractWaveletGene>, Cloneab copy.externalSignalGenes = new ArrayList<ExternalSignalGene>(); for(final AbstractWaveletGene currentGene : this.sequencedGenes) - copy.sequencedGenes.add(currentGene.clone()); + copy.sequencedGenes.add((AbstractWaveletGene) currentGene.clone()); for(final PromoterGene currentGene : this.promoters) - copy.promoters.add(currentGene.clone()); + copy.promoters.add((PromoterGene) currentGene.clone()); for(final SignalGene currentGene : this.localSignalGenes) - copy.localSignalGenes.add(currentGene.clone()); + copy.localSignalGenes.add((SignalGene) currentGene.clone()); for(final ExternalSignalGene currentGene : this.externalSignalGenes) - copy.externalSignalGenes.add(currentGene.clone()); + copy.externalSignalGenes.add((ExternalSignalGene) currentGene.clone()); return copy; } @@ -328,7 +328,7 @@ public class WaveletChromatid implements Chromatid<AbstractWaveletGene>, Cloneab ReceptorKey newReceptorKey = new ReceptorKey(randomKey(keyPool)); //mutate new receptorKey before using it while( Mutations.mutationEvent(this.mutability) ) - newReceptorKey = newReceptorKey.mutate(this.mutability); + newReceptorKey = (ReceptorKey) newReceptorKey.mutate(this.mutability); //create a new gene using the new receptor final AbstractWaveletGene newGene; final SignalKey newSignalKey = new SignalKey(randomKey(keyPool)); diff --git a/src/main/java/com/syncleus/dann/graph/AbstractAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractAdjacencyGraph.java index f7dc1adb7a3bc340c0d1f3d475ea3dc791d5743b..11bac2c41c035b3e7c62169329c5fea6cb0481fc 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractAdjacencyGraph.java @@ -297,7 +297,7 @@ public abstract class AbstractAdjacencyGraph<N, E extends Edge<N>> implements Gr * @return A clone, with the given edge added */ @Override - public AbstractAdjacencyGraph<N, E> cloneAdd(final E newEdge) + public Graph cloneAdd(final E newEdge) { if( newEdge == null ) throw new IllegalArgumentException("newEdge can not be null"); @@ -324,7 +324,7 @@ public abstract class AbstractAdjacencyGraph<N, E extends Edge<N>> implements Gr newAdjacentNodes.get(currentNode).add(currentAdjacentNode); } - final AbstractAdjacencyGraph<N, E> copy = this.clone(); + final AbstractAdjacencyGraph<N, E> copy = (AbstractAdjacencyGraph<N, E>) this.clone(); copy.edges = newEdges; copy.adjacentEdges = newAdjacentEdges; copy.adjacentNodes = newAdjacentNodes; @@ -341,35 +341,35 @@ public abstract class AbstractAdjacencyGraph<N, E extends Edge<N>> implements Gr * @return null */ @Override - public AbstractAdjacencyGraph<N, E> cloneAdd(final N newNode) + public Graph<N, E> cloneAdd(final N newNode) { // TODO fill this in return null; } @Override - public AbstractAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) + public Graph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) { // TODO fill this in return null; } @Override - public AbstractAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) + public Graph<N, E> cloneRemove(final E edgeToRemove) { // TODO fill this in return null; } @Override - public AbstractAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) + public Graph<N, E> cloneRemove(final N nodeToRemove) { // TODO fill this in return null; } @Override - public AbstractAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) + public Graph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) { // TODO fill this in return null; @@ -380,7 +380,7 @@ public abstract class AbstractAdjacencyGraph<N, E extends Edge<N>> implements Gr * @return A clone of the current object, with no changes */ @Override - public AbstractAdjacencyGraph<N, E> clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/graph/AbstractBidirectedAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractBidirectedAdjacencyGraph.java index 1b38ece32b5ee155cdb3f3d68b753cddd11f6168..9d528ff0684626d419de6769fd2fec6cc45dc816 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractBidirectedAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractBidirectedAdjacencyGraph.java @@ -56,46 +56,4 @@ public abstract class AbstractBidirectedAdjacencyGraph<N, E extends BidirectedEd } return Collections.unmodifiableSet(inEdges); } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public AbstractBidirectedAdjacencyGraph<N, E> clone() - { - return (AbstractBidirectedAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractBidirectedEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractBidirectedEdge.java index 7cad24353ab92356fec42e8fa1470b97df4c246d..ed37961f634631e2a422740bdd4d7ecc2961af83 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractBidirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractBidirectedEdge.java @@ -177,12 +177,6 @@ public abstract class AbstractBidirectedEdge<N> extends AbstractEdge<N> implemen } } - @Override - public AbstractBidirectedEdge<N> clone() - { - return (AbstractBidirectedEdge<N>) super.clone(); - } - @Override public BidirectedEdgeXml toXml() { diff --git a/src/main/java/com/syncleus/dann/graph/AbstractDirectedAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractDirectedAdjacencyGraph.java index 67a162bfe1245ba0a7d03ffeb868eee802425451..4c1a06503c0953a35eeea19f58528e0ef48983a5 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractDirectedAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractDirectedAdjacencyGraph.java @@ -36,46 +36,4 @@ public abstract class AbstractDirectedAdjacencyGraph<N, E extends DirectedEdge<N { super(nodes, edges); } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public AbstractDirectedAdjacencyGraph<N, E> clone() - { - return (AbstractDirectedAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractDirectedEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractDirectedEdge.java index bab69395cd2d231294463d5a1830a3221ac2f6f7..81534482e7e17b72b94c821ed51afb064e84bab4 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractDirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractDirectedEdge.java @@ -101,28 +101,22 @@ public abstract class AbstractDirectedEdge<N> extends AbstractBidirectedEdge<N> } @Override - public AbstractDirectedEdge<N> disconnect(final N node) + public Edge<N> disconnect(final N node) { if( node == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().contains(node) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractDirectedEdge<N>) this.remove(node); + return this.remove(node); } @Override - public AbstractDirectedEdge<N> disconnect(final List<N> nodes) + public Edge<N> disconnect(final List<N> nodes) { if( nodes == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().containsAll(nodes) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractDirectedEdge<N>) this.remove(nodes); - } - - @Override - public AbstractDirectedEdge<N> clone() - { - return (AbstractDirectedEdge<N>) super.clone(); + return this.remove(nodes); } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractEdge.java index 3fedb0b60d1db1939d2098214c3e1789b0a2ed7a..5f4d691550a9f6e9208abaaff86005657fca64e6 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractEdge.java @@ -68,7 +68,7 @@ public abstract class AbstractEdge<N> extends AbstractContextGraphElement<Graph< final List<N> nodesCopy = new ArrayList<N>(ourNodes.size()); for(N ourNode : ourNodes) { - if( this.contextEnabled && ( ourNode instanceof ContextNode ) && ( !((ContextNode)ourNode).connectingEdge(this) )) + if (this.contextEnabled && (ourNode instanceof ContextNode) && (!((ContextNode)ourNode).connectingEdge(this))) continue; nodesCopy.add(ourNode); } @@ -193,7 +193,7 @@ public abstract class AbstractEdge<N> extends AbstractContextGraphElement<Graph< } @Override - public AbstractEdge<N> clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/graph/AbstractHyperAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractHyperAdjacencyGraph.java index 973fb598546c1cdd06548e58f1fcffcb4ae1653f..70d0c9265cbc5706614b0ebea42f1e452ddccc6a 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractHyperAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractHyperAdjacencyGraph.java @@ -79,46 +79,4 @@ public abstract class AbstractHyperAdjacencyGraph<N, E extends HyperEdge<N>> ext { return -1; } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (AbstractHyperAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public AbstractHyperAdjacencyGraph<N, E> clone() - { - return (AbstractHyperAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractHyperEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractHyperEdge.java index c98af1fd7b9455e4c382dee772ac02c66279401b..22037babe702f784d8f29a8cccbe097d6ac7d04a 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractHyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractHyperEdge.java @@ -68,49 +68,43 @@ public abstract class AbstractHyperEdge<N> extends AbstractEdge<N> implements Hy } @Override - public AbstractHyperEdge<N> connect(final N node) + public HyperEdge<N> connect(final N node) { if( node == null ) throw new IllegalArgumentException("node can not be null"); if( this.getNodes().contains(node) ) throw new IllegalArgumentException("node is already connected"); - return (AbstractHyperEdge<N>) this.add(node); + return (HyperEdge<N>) this.add(node); } @Override - public AbstractHyperEdge<N> connect(final List<N> nodes) + public HyperEdge<N> connect(final List<N> nodes) { if( nodes == null ) throw new IllegalArgumentException("node can not be null"); for(final N node : nodes) if( this.getNodes().contains(node) ) throw new IllegalArgumentException("node is already connected"); - return (AbstractHyperEdge<N>) this.add(nodes); + return (HyperEdge<N>) this.add(nodes); } @Override - public AbstractHyperEdge<N> disconnect(final N node) + public Edge<N> disconnect(final N node) { if( node == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().contains(node) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractHyperEdge<N>) this.remove(node); + return this.remove(node); } @Override - public AbstractHyperEdge<N> disconnect(final List<N> nodes) + public Edge<N> disconnect(final List<N> nodes) { if( nodes == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().containsAll(nodes) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractHyperEdge<N>) this.remove(nodes); - } - - @Override - public AbstractHyperEdge<N> clone() - { - return (AbstractHyperEdge<N>) super.clone(); + return this.remove(nodes); } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractRootedTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractRootedTreeAdjacencyGraph.java index 398e66838cf4e546f682e56ea6c0f9bef2dd617a..1e645eb823f5ebf584b904acf7d9ed0148ca50e1 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractRootedTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractRootedTreeAdjacencyGraph.java @@ -70,44 +70,38 @@ public abstract class AbstractRootedTreeAdjacencyGraph<N, E extends DirectedEdge // TODO ensure these clones cant produce non-rooted trees @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) + public Graph<N, E> cloneAdd(final E newEdge) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); } @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) + public Graph<N, E> cloneAdd(final N newNode) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); } @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) + public Graph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); } @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) + public Graph<N, E> cloneRemove(final E edgeToRemove) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); } @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) + public Graph<N, E> cloneRemove(final N nodeToRemove) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); } @Override - public AbstractRootedTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) + public Graph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) { return (AbstractRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); } - - @Override - public AbstractRootedTreeAdjacencyGraph<N, E> clone() - { - return (AbstractRootedTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/AbstractTreeAdjacencyGraph.java index 14b0ac2e76706ecc11fc5a4ef0e0bbb12b20cb08..05d630503a509967b179fa447332a47905615937 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractTreeAdjacencyGraph.java @@ -81,44 +81,38 @@ public abstract class AbstractTreeAdjacencyGraph<N, E extends BidirectedEdge<N>> // TODO make sure these clones cant produce non-tree graphs. @Override - public AbstractTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) + public Graph<N, E> cloneAdd(final E newEdge) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); } @Override - public AbstractTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) + public Graph<N, E> cloneAdd(final N newNode) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); } @Override - public AbstractTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) + public Graph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); } @Override - public AbstractTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) + public Graph<N, E> cloneRemove(final E edgeToRemove) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); } @Override - public AbstractTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) + public Graph<N, E> cloneRemove(final N nodeToRemove) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); } @Override - public AbstractTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) + public Graph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) { return (AbstractTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); } - - @Override - public AbstractTreeAdjacencyGraph<N, E> clone() - { - return (AbstractTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractUndirectedEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractUndirectedEdge.java index 74a577f337d4c568ab08c724361424664433b781..d950fbc110b0de3bd397068239c485dc76b826e2 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractUndirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractUndirectedEdge.java @@ -83,28 +83,22 @@ public abstract class AbstractUndirectedEdge<N> extends AbstractBidirectedEdge<N } @Override - public AbstractUndirectedEdge<N> disconnect(final N node) + public Edge<N> disconnect(final N node) { if( node == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().contains(node) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractUndirectedEdge<N>) this.remove(node); + return this.remove(node); } @Override - public AbstractUndirectedEdge<N> disconnect(final List<N> nodes) + public Edge<N> disconnect(final List<N> nodes) { if( nodes == null ) throw new IllegalArgumentException("node can not be null"); if( !this.getNodes().containsAll(nodes) ) throw new IllegalArgumentException("node is not currently connected to"); - return (AbstractUndirectedEdge<N>) this.remove(nodes); - } - - @Override - public AbstractUndirectedEdge<N> clone() - { - return (AbstractUndirectedEdge<N>) super.clone(); + return this.remove(nodes); } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractWeightedBidirectedEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractWeightedBidirectedEdge.java index d0c1d628d4c79812c1d9afda6139ddcbdf2d17f2..d2bb7bce80a79dd298ec662e9f9303029e851520 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractWeightedBidirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractWeightedBidirectedEdge.java @@ -53,10 +53,4 @@ public abstract class AbstractWeightedBidirectedEdge<N> extends AbstractBidirect { return this.weight; } - - @Override - public AbstractWeightedBidirectedEdge<N> clone() - { - return (AbstractWeightedBidirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/AbstractWeightedEdge.java b/src/main/java/com/syncleus/dann/graph/AbstractWeightedEdge.java index e76155ef5c7c38b73291db74991d42960b4ac97c..43b5e9959aa87a6b3a7569ba85b61681a00bc424 100644 --- a/src/main/java/com/syncleus/dann/graph/AbstractWeightedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/AbstractWeightedEdge.java @@ -53,10 +53,4 @@ public abstract class AbstractWeightedEdge<N> extends AbstractEdge<N> implements { return this.weight; } - - @Override - public AbstractWeightedEdge<N> clone() - { - return (AbstractWeightedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/BidirectedEdge.java b/src/main/java/com/syncleus/dann/graph/BidirectedEdge.java index 4baff40b2bde175b764cc46b720f479fe88d03b3..7a23ae1902d57cacf3cd1262d32d38e276f4c037 100644 --- a/src/main/java/com/syncleus/dann/graph/BidirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/BidirectedEdge.java @@ -37,10 +37,4 @@ public interface BidirectedEdge<N> extends Edge<N> boolean isLooseEdge(); boolean isOrdinaryEdge(); boolean isLoop(); - @Override - BidirectedEdge<N> disconnect(N node); - @Override - BidirectedEdge<N> disconnect(List<N> node); - @Override - BidirectedEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/DirectedEdge.java b/src/main/java/com/syncleus/dann/graph/DirectedEdge.java index eca10ca4bcc469ae267f480e9a13f562a301498b..ec70a70c39402728b4a6740336b21714f696b79c 100644 --- a/src/main/java/com/syncleus/dann/graph/DirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/DirectedEdge.java @@ -18,16 +18,8 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public interface DirectedEdge<N> extends BidirectedEdge<N> { N getSourceNode(); N getDestinationNode(); - @Override - DirectedEdge<N> disconnect(N node); - @Override - DirectedEdge<N> disconnect(List<N> node); - @Override - DirectedEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/Edge.java b/src/main/java/com/syncleus/dann/graph/Edge.java index 5d23f6f5e1ed4631a77f190ba829651e2ec64f9f..5bb83efcf974333a43d918a3be1d788704a1a87f 100644 --- a/src/main/java/com/syncleus/dann/graph/Edge.java +++ b/src/main/java/com/syncleus/dann/graph/Edge.java @@ -50,6 +50,4 @@ public interface Edge<N> extends Serializable, Cloneable, XmlSerializable<EdgeXm * removing the specified nodes. */ Edge<N> disconnect(List<N> node); - - Edge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/Graph.java b/src/main/java/com/syncleus/dann/graph/Graph.java index c55d19604cf5d2e32b99599d391190407fa03d23..0e4f46d7310c04d146a3da5e4c9f479b0d7dd7c6 100644 --- a/src/main/java/com/syncleus/dann/graph/Graph.java +++ b/src/main/java/com/syncleus/dann/graph/Graph.java @@ -160,5 +160,4 @@ public interface Graph<N, E extends Edge<N>> extends Serializable, Cloneable, Xm * @since 2.0 */ Graph<N, E> cloneRemove(Set<N> deleteNodes, Set<E> deleteEdges); - Graph<N, E> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/HyperEdge.java b/src/main/java/com/syncleus/dann/graph/HyperEdge.java index 2877305f04dcc1a890119be75898dc3531e74d90..522468ce99eabc5ceb750b17b45060da8ba34508 100644 --- a/src/main/java/com/syncleus/dann/graph/HyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/HyperEdge.java @@ -26,10 +26,4 @@ public interface HyperEdge<N> extends Edge<N> boolean isSymmetric(HyperEdge symmetricEdge); HyperEdge<N> connect(N node); HyperEdge<N> connect(List<N> node); - @Override - HyperEdge<N> disconnect(N node); - @Override - HyperEdge<N> disconnect(List<N> node); - @Override - HyperEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/ImmutableAdjacencyGraph.java index 29369bb5276486c9348625e044868b95b3131984..37adf259f759153b36ede29c2394fc7f589c7544 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableAdjacencyGraph.java @@ -73,48 +73,6 @@ public class ImmutableAdjacencyGraph<N, E extends Edge<N>> extends AbstractAdjac return newAdjacentNodes; } - @Override - public ImmutableAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableAdjacencyGraph<N, E> clone() - { - return (ImmutableAdjacencyGraph<N, E>) super.clone(); - } - @Override public GraphXml toXml(final Namer<Object> namer) { diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableDirectedAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/ImmutableDirectedAdjacencyGraph.java index 1d1e6c0bf19f005a4f9b957f24d29e1074a5d07f..92f732d0bd2686412af5e47afde479f9f1c20f17 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableDirectedAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableDirectedAdjacencyGraph.java @@ -69,46 +69,4 @@ public class ImmutableDirectedAdjacencyGraph<N, E extends DirectedEdge<N>> exten newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableDirectedAdjacencyGraph<N, E> clone() - { - return (ImmutableDirectedAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableDirectedEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableDirectedEdge.java index dacac5cb9056a1e6b672a0e464c89ab32962119a..32c80b6d3d15303a71edd4c959cc04bee6a0d09a 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableDirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableDirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class ImmutableDirectedEdge<N> extends AbstractDirectedEdge<N> { private static final long serialVersionUID = 94357801283489L; @@ -33,22 +31,4 @@ public final class ImmutableDirectedEdge<N> extends AbstractDirectedEdge<N> { super(source, destination, allowJoiningMultipleGraphs, contextEnabled); } - - @Override - public ImmutableDirectedEdge<N> disconnect(final N node) - { - return (ImmutableDirectedEdge<N>) super.disconnect(node); - } - - @Override - public ImmutableDirectedEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableDirectedEdge<N>) super.disconnect(nodes); - } - - @Override - public ImmutableDirectedEdge<N> clone() - { - return (ImmutableDirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableHyperAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/ImmutableHyperAdjacencyGraph.java index 2f7c2dc191348f1ee5eac2aa4783ad862acabe9c..8b02ace311151733bbaabe9e7c47ce4d1eaf88e4 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableHyperAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableHyperAdjacencyGraph.java @@ -69,46 +69,4 @@ public class ImmutableHyperAdjacencyGraph<N, E extends HyperEdge<N>> extends Abs newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableHyperAdjacencyGraph<N, E> clone() - { - return (ImmutableHyperAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableHyperEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableHyperEdge.java index 06cdea927a8360936756531d8dbe8cd5b1e18409..9df968d6dd4a74f3bfbb961199c356897bb39fe0 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableHyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableHyperEdge.java @@ -43,34 +43,4 @@ public final class ImmutableHyperEdge<N> extends AbstractHyperEdge<N> { super(allowJoiningMultipleGraphs, contextEnabled, nodes); } - - @Override - public ImmutableHyperEdge<N> connect(final N node) - { - return (ImmutableHyperEdge<N>) super.connect(node); - } - - @Override - public ImmutableHyperEdge<N> connect(final List<N> nodes) - { - return (ImmutableHyperEdge<N>) super.connect(nodes); - } - - @Override - public ImmutableHyperEdge<N> disconnect(final N node) - { - return (ImmutableHyperEdge<N>) super.disconnect(node); - } - - @Override - public ImmutableHyperEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableHyperEdge<N>) super.disconnect(nodes); - } - - @Override - public ImmutableHyperEdge<N> clone() - { - return (ImmutableHyperEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableRootedTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/ImmutableRootedTreeAdjacencyGraph.java index a2b7d1ae435fe00e90af35728c7ee9b145a2f0d0..758eed5f8255ef81e5c69a5f50333b5357fdf315 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableRootedTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableRootedTreeAdjacencyGraph.java @@ -68,46 +68,4 @@ public class ImmutableRootedTreeAdjacencyGraph<N, E extends DirectedEdge<N>> ext newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableRootedTreeAdjacencyGraph<N, E> clone() - { - return (ImmutableRootedTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/ImmutableTreeAdjacencyGraph.java index efa197b5f9216d0eb86affd4dbcaaec32b336d64..c79685e3b5c3a16f0e546d4b15ea542a03139e73 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableTreeAdjacencyGraph.java @@ -69,46 +69,4 @@ public class ImmutableTreeAdjacencyGraph<N, E extends BidirectedEdge<N>> extends newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableTreeAdjacencyGraph<N, E> clone() - { - return (ImmutableTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableUndirectedEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableUndirectedEdge.java index 7f23e46d419f8743f1ecd2641a33ebc056dde59a..6363d1061ebfe127d13ef2e58d73ffcdedae25c5 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableUndirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableUndirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class ImmutableUndirectedEdge<N> extends AbstractUndirectedEdge<N> { private static final long serialVersionUID = -1803274027851230L; @@ -33,22 +31,4 @@ public final class ImmutableUndirectedEdge<N> extends AbstractUndirectedEdge<N> { super(leftNode, rightNode, allowJoiningMultipleGraphs, contextEnabled); } - - @Override - public ImmutableUndirectedEdge<N> disconnect(final N node) - { - return (ImmutableUndirectedEdge<N>) super.disconnect(node); - } - - @Override - public ImmutableUndirectedEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableUndirectedEdge<N>) super.disconnect(nodes); - } - - @Override - public ImmutableUndirectedEdge<N> clone() - { - return (ImmutableUndirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedDirectedEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedDirectedEdge.java index 0fe340f3ad00012b33116f5dc985723190419b74..d334abb52167c8a1c32671fa3f6ea53906b9e09a 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedDirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedDirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class ImmutableWeightedDirectedEdge<N> extends AbstractDirectedEdge<N> implements WeightedDirectedEdge<N> { private static final long serialVersionUID = -6843921044147012645L; @@ -42,22 +40,4 @@ public final class ImmutableWeightedDirectedEdge<N> extends AbstractDirectedEdge { return this.weight; } - - @Override - public ImmutableWeightedDirectedEdge<N> disconnect(final N node) - { - return (ImmutableWeightedDirectedEdge<N>) super.disconnect(node); - } - - @Override - public ImmutableWeightedDirectedEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableWeightedDirectedEdge<N>) super.disconnect(nodes); - } - - @Override - public ImmutableWeightedDirectedEdge<N> clone() - { - return (ImmutableWeightedDirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedHyperEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedHyperEdge.java index 4ac6a256ffacaa5e366f760bac7304665eb1b837..812c415d55199c61c518c229a99a40cabe3f9332 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedHyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedHyperEdge.java @@ -42,22 +42,4 @@ public final class ImmutableWeightedHyperEdge<N> extends AbstractHyperEdge<N> im { return this.weight; } - - @Override - public ImmutableWeightedHyperEdge<N> disconnect(final N node) - { - return (ImmutableWeightedHyperEdge<N>) super.remove(node); - } - - @Override - public ImmutableWeightedHyperEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableWeightedHyperEdge<N>) super.remove(nodes); - } - - @Override - public ImmutableWeightedHyperEdge<N> clone() - { - return (ImmutableWeightedHyperEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedUndirectedEdge.java b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedUndirectedEdge.java index 2afe38cbf4dbfd41feefa7226ba6197c952016c4..0e03ee356adc67abe7054be8933eeeec685c72e4 100644 --- a/src/main/java/com/syncleus/dann/graph/ImmutableWeightedUndirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/ImmutableWeightedUndirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class ImmutableWeightedUndirectedEdge<N> extends AbstractUndirectedEdge<N> implements WeightedBidirectedEdge<N> { private static final long serialVersionUID = 4622255810663472765L; @@ -42,22 +40,4 @@ public final class ImmutableWeightedUndirectedEdge<N> extends AbstractUndirected { return this.weight; } - - @Override - public ImmutableWeightedUndirectedEdge<N> disconnect(final N node) - { - return (ImmutableWeightedUndirectedEdge<N>) this.remove(node); - } - - @Override - public ImmutableWeightedUndirectedEdge<N> disconnect(final List<N> nodes) - { - return (ImmutableWeightedUndirectedEdge<N>) this.remove(nodes); - } - - @Override - public ImmutableWeightedUndirectedEdge<N> clone() - { - return (ImmutableWeightedUndirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/MutableAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/MutableAdjacencyGraph.java index 4e252e5978062fac3d5a0f6829deed1fd91e7dbc..fed46bf3abe6b638a4ec3f323b81cab5e61d60d1 100644 --- a/src/main/java/com/syncleus/dann/graph/MutableAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/MutableAdjacencyGraph.java @@ -198,46 +198,4 @@ public class MutableAdjacencyGraph<N, E extends Edge<N>> extends AbstractAdjacen return removedSomething; } - - @Override - public MutableAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (MutableAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (MutableAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableAdjacencyGraph<N, E> clone() - { - return (MutableAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/MutableDirectedAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/MutableDirectedAdjacencyGraph.java index ed8f003bd19292c10c6c5cb7d61736926092582c..89baaf1473078b38afb2880f7991cf86f5968742 100644 --- a/src/main/java/com/syncleus/dann/graph/MutableDirectedAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/MutableDirectedAdjacencyGraph.java @@ -198,46 +198,4 @@ public class MutableDirectedAdjacencyGraph<N, E extends DirectedEdge<N>> extends return removedSomething; } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableDirectedAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableDirectedAdjacencyGraph<N, E> clone() - { - return (MutableDirectedAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/MutableHyperAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/MutableHyperAdjacencyGraph.java index bc6ae075fd82de475e937e4de25030b69c5dc6f3..ab7b58c0f18b51a037fc6164c926e7bd1afd19ce 100644 --- a/src/main/java/com/syncleus/dann/graph/MutableHyperAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/MutableHyperAdjacencyGraph.java @@ -198,46 +198,4 @@ public class MutableHyperAdjacencyGraph<N, E extends HyperEdge<N>> extends Abstr return removedSomething; } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableHyperAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableHyperAdjacencyGraph<N, E> clone() - { - return (MutableHyperAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/MutableRootedTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/MutableRootedTreeAdjacencyGraph.java index 6c55382aa63c2a596fc4a542a1afdb866cbad8c8..fb60fc6fb33626bb762a2bd46a1a53bc4365a2cb 100644 --- a/src/main/java/com/syncleus/dann/graph/MutableRootedTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/MutableRootedTreeAdjacencyGraph.java @@ -198,46 +198,4 @@ public class MutableRootedTreeAdjacencyGraph<N, E extends DirectedEdge<N>> exten return removedSomething; } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableRootedTreeAdjacencyGraph<N, E> clone() - { - return (MutableRootedTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/MutableTreeAdjacencyGraph.java b/src/main/java/com/syncleus/dann/graph/MutableTreeAdjacencyGraph.java index 8e2b6746714cee10b2d68d00c584ebc7807662af..8f375a7f4a71704482ce182821a09d94bf1c8532 100644 --- a/src/main/java/com/syncleus/dann/graph/MutableTreeAdjacencyGraph.java +++ b/src/main/java/com/syncleus/dann/graph/MutableTreeAdjacencyGraph.java @@ -210,44 +210,38 @@ public class MutableTreeAdjacencyGraph<N, E extends BidirectedEdge<N>> extends A //TODO make sure these clone methods done generate a non-tree TreeGraoh @Override - public MutableTreeAdjacencyGraph<N, E> cloneAdd(final E newEdge) + public Graph<N, E> cloneAdd(final E newEdge) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newEdge); } @Override - public MutableTreeAdjacencyGraph<N, E> cloneAdd(final N newNode) + public Graph<N, E> cloneAdd(final N newNode) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newNode); } @Override - public MutableTreeAdjacencyGraph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) + public Graph<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneAdd(newNodes, newEdges); } @Override - public MutableTreeAdjacencyGraph<N, E> cloneRemove(final E edgeToRemove) + public Graph<N, E> cloneRemove(final E edgeToRemove) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneRemove(edgeToRemove); } @Override - public MutableTreeAdjacencyGraph<N, E> cloneRemove(final N nodeToRemove) + public Graph<N, E> cloneRemove(final N nodeToRemove) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneRemove(nodeToRemove); } @Override - public MutableTreeAdjacencyGraph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) + public Graph<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) { return (MutableTreeAdjacencyGraph<N, E>) super.cloneRemove(deleteNodes, deleteEdges); } - - @Override - public MutableTreeAdjacencyGraph<N, E> clone() - { - return (MutableTreeAdjacencyGraph<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/SimpleWeightedDirectedEdge.java b/src/main/java/com/syncleus/dann/graph/SimpleWeightedDirectedEdge.java index a40d955603407ded83c6453abd9d022d08b77d79..9e439ae3861ea3247aef8e3f032d71ef5e34824b 100644 --- a/src/main/java/com/syncleus/dann/graph/SimpleWeightedDirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/SimpleWeightedDirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class SimpleWeightedDirectedEdge<N> extends AbstractDirectedEdge<N> implements WeightedDirectedEdge<N>, MutableWeighted { private static final long serialVersionUID = -6843921044147012645L; @@ -48,22 +46,4 @@ public final class SimpleWeightedDirectedEdge<N> extends AbstractDirectedEdge<N> { this.weight = newWeight; } - - @Override - public SimpleWeightedDirectedEdge<N> disconnect(final N node) - { - return (SimpleWeightedDirectedEdge<N>) super.disconnect(node); - } - - @Override - public SimpleWeightedDirectedEdge<N> disconnect(final List<N> nodes) - { - return (SimpleWeightedDirectedEdge<N>) super.disconnect(nodes); - } - - @Override - public SimpleWeightedDirectedEdge<N> clone() - { - return (SimpleWeightedDirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/SimpleWeightedHyperEdge.java b/src/main/java/com/syncleus/dann/graph/SimpleWeightedHyperEdge.java index ba9d72ebe33abe4d10aa539c1a4689a174a12cbd..f53995d773545871ae3e010f30521998fc228650 100644 --- a/src/main/java/com/syncleus/dann/graph/SimpleWeightedHyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/SimpleWeightedHyperEdge.java @@ -48,22 +48,4 @@ public final class SimpleWeightedHyperEdge<N> extends AbstractHyperEdge<N> imple { this.weight = newWeight; } - - @Override - public SimpleWeightedHyperEdge<N> disconnect(final N node) - { - return (SimpleWeightedHyperEdge<N>) super.disconnect(node); - } - - @Override - public SimpleWeightedHyperEdge<N> disconnect(final List<N> nodes) - { - return (SimpleWeightedHyperEdge<N>) super.disconnect(nodes); - } - - @Override - public SimpleWeightedHyperEdge<N> clone() - { - return (SimpleWeightedHyperEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/SimpleWeightedUndirectedEdge.java b/src/main/java/com/syncleus/dann/graph/SimpleWeightedUndirectedEdge.java index d80afff788cf15b380a89e189f84fed4e7132ce3..22ab180e5352a6437d4c0262a5d2ebf7b789285e 100644 --- a/src/main/java/com/syncleus/dann/graph/SimpleWeightedUndirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/SimpleWeightedUndirectedEdge.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public final class SimpleWeightedUndirectedEdge<N> extends AbstractUndirectedEdge<N> implements WeightedBidirectedEdge<N>, MutableWeighted { private static final long serialVersionUID = 4622255810663472765L; @@ -48,22 +46,4 @@ public final class SimpleWeightedUndirectedEdge<N> extends AbstractUndirectedEdg { this.weight = newWeight; } - - @Override - public SimpleWeightedUndirectedEdge<N> disconnect(final N node) - { - return (SimpleWeightedUndirectedEdge<N>) super.disconnect(node); - } - - @Override - public SimpleWeightedUndirectedEdge<N> disconnect(final List<N> nodes) - { - return (SimpleWeightedUndirectedEdge<N>) super.disconnect(nodes); - } - - @Override - public SimpleWeightedUndirectedEdge<N> clone() - { - return (SimpleWeightedUndirectedEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graph/WeightedBidirectedEdge.java b/src/main/java/com/syncleus/dann/graph/WeightedBidirectedEdge.java index 43c56ee81474dcbc5e95468a70bd1b4fa1b89c00..2feae3b663fda89f37d2c6855b3b4c8bd8683142 100644 --- a/src/main/java/com/syncleus/dann/graph/WeightedBidirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/WeightedBidirectedEdge.java @@ -18,14 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public interface WeightedBidirectedEdge<N> extends BidirectedEdge<N>, Weighted { - @Override - WeightedBidirectedEdge<N> disconnect(N node); - @Override - WeightedBidirectedEdge<N> disconnect(List<N> node); - @Override - WeightedBidirectedEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/WeightedDirectedEdge.java b/src/main/java/com/syncleus/dann/graph/WeightedDirectedEdge.java index fb5678d572eac220ab84fac0f264dc8fbb6a662a..11dc7377df2ee4600e73ebcfa68205189c88e56e 100644 --- a/src/main/java/com/syncleus/dann/graph/WeightedDirectedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/WeightedDirectedEdge.java @@ -18,14 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public interface WeightedDirectedEdge<N> extends DirectedEdge<N>, Weighted { - @Override - WeightedDirectedEdge<N> disconnect(N node); - @Override - WeightedDirectedEdge<N> disconnect(List<N> node); - @Override - WeightedDirectedEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/WeightedEdge.java b/src/main/java/com/syncleus/dann/graph/WeightedEdge.java index 2ac0ed82000e86359135981940a3cedc98a5ac85..8af5bc38b2960f68b1cef7a69c50b1682b89a224 100644 --- a/src/main/java/com/syncleus/dann/graph/WeightedEdge.java +++ b/src/main/java/com/syncleus/dann/graph/WeightedEdge.java @@ -18,14 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public interface WeightedEdge<N> extends Edge<N>, Weighted { - @Override - WeightedEdge<N> disconnect(N node); - @Override - WeightedEdge<N> disconnect(List<N> node); - @Override - WeightedEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/WeightedHyperEdge.java b/src/main/java/com/syncleus/dann/graph/WeightedHyperEdge.java index c242e4ee8580af9c8171f2310d534714664a3c23..dee22cb8d2d0394ae81811fc9db4246570197807 100644 --- a/src/main/java/com/syncleus/dann/graph/WeightedHyperEdge.java +++ b/src/main/java/com/syncleus/dann/graph/WeightedHyperEdge.java @@ -18,14 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graph; -import java.util.List; - public interface WeightedHyperEdge<N> extends HyperEdge<N>, Weighted { - @Override - WeightedHyperEdge<N> disconnect(N node); - @Override - WeightedHyperEdge<N> disconnect(List<N> node); - @Override - WeightedHyperEdge<N> clone(); } diff --git a/src/main/java/com/syncleus/dann/graph/context/AbstractSignalingContextEdge.java b/src/main/java/com/syncleus/dann/graph/context/AbstractSignalingContextEdge.java index 9360010de6b8033df67509ecba69c0e2927ed598..97721963d1ea5516ab1dcab97e6cde0af228e4ef 100644 --- a/src/main/java/com/syncleus/dann/graph/context/AbstractSignalingContextEdge.java +++ b/src/main/java/com/syncleus/dann/graph/context/AbstractSignalingContextEdge.java @@ -47,7 +47,4 @@ public abstract class AbstractSignalingContextEdge<N, S> extends AbstractContext ((SignalContextNode)traversableNode).neighborNodeStateChanged(this, node, newState); } } - - @Override - public abstract AbstractSignalingContextEdge<N, S> clone(); } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/AbstractBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/AbstractBayesianAdjacencyNetwork.java index d7d56229f77f81a9b07fa2bc769aaba9d5f251bb..0127db8cdf6647a00eb23e2193410ac12012ead8 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/AbstractBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/AbstractBayesianAdjacencyNetwork.java @@ -128,48 +128,6 @@ public abstract class AbstractBayesianAdjacencyNetwork<N extends BayesianNode, E } } - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public AbstractBayesianAdjacencyNetwork<N, E> clone() - { - return (AbstractBayesianAdjacencyNetwork<N, E>) super.clone(); - } - @Override public BayesianNetworkXml toXml() { diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/ImmutableBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/ImmutableBayesianAdjacencyNetwork.java index 73673bfedf6cac2ed659931f1bceed6a27e1bc64..d0db47dfba8bd599cebe815b78d0b507303135a8 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/ImmutableBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/ImmutableBayesianAdjacencyNetwork.java @@ -72,46 +72,4 @@ public class ImmutableBayesianAdjacencyNetwork<N extends BayesianNode, E extends newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableBayesianAdjacencyNetwork<N, E> clone() - { - return (ImmutableBayesianAdjacencyNetwork<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/MutableBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/MutableBayesianAdjacencyNetwork.java index 4d2660977eceea62ff8400757e008e11886c244b..e4e645d3be55387ef797c386b09a9c576c0414a5 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/MutableBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/MutableBayesianAdjacencyNetwork.java @@ -199,46 +199,4 @@ public class MutableBayesianAdjacencyNetwork<N extends BayesianNode, E extends B return removedSomething; } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableBayesianAdjacencyNetwork<N, E> clone() - { - return (MutableBayesianAdjacencyNetwork<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/SimpleBayesianEdge.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/SimpleBayesianEdge.java index e86ca89d80930974a0cbcaf84a0ecdee083adce3..b8c4f49964f3af2c4c574bf2b84cc48b1017d912 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/SimpleBayesianEdge.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/SimpleBayesianEdge.java @@ -18,7 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.graphicalmodel.bayesian; -import java.util.List; import com.syncleus.dann.graph.AbstractDirectedEdge; public final class SimpleBayesianEdge<N extends BayesianNode> extends AbstractDirectedEdge<N> implements BayesianEdge<N> @@ -39,22 +38,4 @@ public final class SimpleBayesianEdge<N extends BayesianNode> extends AbstractDi { return this.getSourceNode().getState(); } - - @Override - public SimpleBayesianEdge<N> disconnect(final N node) - { - return (SimpleBayesianEdge<N>) this.remove(node); - } - - @Override - public SimpleBayesianEdge<N> disconnect(final List<N> nodes) - { - return (SimpleBayesianEdge<N>) this.remove(nodes); - } - - @Override - public SimpleBayesianEdge<N> clone() - { - return (SimpleBayesianEdge<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/AbstractDynamicBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/AbstractDynamicBayesianAdjacencyNetwork.java index f898f2c70ecef4ed3a48788d1f253bf9a6a5539e..e7740ebb83dca1ba35838a0a1295841c401727be 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/AbstractDynamicBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/AbstractDynamicBayesianAdjacencyNetwork.java @@ -48,46 +48,4 @@ public abstract class AbstractDynamicBayesianAdjacencyNetwork<N extends DynamicB node.learnState(updateHistory); } } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public AbstractDynamicBayesianAdjacencyNetwork<N, E> clone() - { - return (AbstractDynamicBayesianAdjacencyNetwork<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/ImmutableDynamicBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/ImmutableDynamicBayesianAdjacencyNetwork.java index bf116fa08e28fb055cd53b6180ea3a5de4fd8cd4..ee393a9616d5acd25797c8123c6c15b9cd594747 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/ImmutableDynamicBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/ImmutableDynamicBayesianAdjacencyNetwork.java @@ -71,46 +71,4 @@ public class ImmutableDynamicBayesianAdjacencyNetwork<N extends DynamicBayesianN newAdjacentNodes.put(neighborNodeEntry.getKey(), new ArrayList<N>(neighborNodeEntry.getValue())); return newAdjacentNodes; } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public ImmutableDynamicBayesianAdjacencyNetwork<N, E> clone() - { - return (ImmutableDynamicBayesianAdjacencyNetwork<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/MutableDynamicBayesianAdjacencyNetwork.java b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/MutableDynamicBayesianAdjacencyNetwork.java index 89de2aae86420d2a51ad68c6a53b3bb8f4c56fa9..349cfe3a1c20f988422b971693d116ecbc6f842f 100644 --- a/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/MutableDynamicBayesianAdjacencyNetwork.java +++ b/src/main/java/com/syncleus/dann/graphicalmodel/bayesian/dynamic/MutableDynamicBayesianAdjacencyNetwork.java @@ -200,46 +200,4 @@ public class MutableDynamicBayesianAdjacencyNetwork<N extends DynamicBayesianNod return removedSomething; } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final E newEdge) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newEdge); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final N newNode) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNode); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneAdd(final Set<N> newNodes, final Set<E> newEdges) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneAdd(newNodes, newEdges); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final E edgeToRemove) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(edgeToRemove); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final N nodeToRemove) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(nodeToRemove); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> cloneRemove(final Set<N> deleteNodes, final Set<E> deleteEdges) - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.cloneRemove(deleteNodes, deleteEdges); - } - - @Override - public MutableDynamicBayesianAdjacencyNetwork<N, E> clone() - { - return (MutableDynamicBayesianAdjacencyNetwork<N, E>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/math/AbstractFunction.java b/src/main/java/com/syncleus/dann/math/AbstractFunction.java index 4d28827b5b1c553186c944e066ad5f954bc6adde..471d17820cf0141f9185e6d29acb011b33acb2b1 100644 --- a/src/main/java/com/syncleus/dann/math/AbstractFunction.java +++ b/src/main/java/com/syncleus/dann/math/AbstractFunction.java @@ -110,7 +110,7 @@ public abstract class AbstractFunction implements Cloneable, Function @Override @SuppressWarnings("unchecked") - public AbstractFunction clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/math/linear/SimpleRealMatrix.java b/src/main/java/com/syncleus/dann/math/linear/SimpleRealMatrix.java index ed00c0c80fa844812ab999b75f7b74c25b2152f1..21d8b1eafe6ba9b0874de3d6940021a862ba6484 100644 --- a/src/main/java/com/syncleus/dann/math/linear/SimpleRealMatrix.java +++ b/src/main/java/com/syncleus/dann/math/linear/SimpleRealMatrix.java @@ -182,7 +182,7 @@ public class SimpleRealMatrix implements Cloneable, Serializable, RealMatrix } @Override - public SimpleRealMatrix clone() + public Object clone() { try { diff --git a/src/main/java/com/syncleus/dann/math/wave/SharpenedWaveFunction.java b/src/main/java/com/syncleus/dann/math/wave/SharpenedWaveFunction.java index d0b1a79eba93210cf53b59b6fcaf440d8b4dec38..d472fbfa1c3cc892aa689da5bbbd5912776c81a5 100644 --- a/src/main/java/com/syncleus/dann/math/wave/SharpenedWaveFunction.java +++ b/src/main/java/com/syncleus/dann/math/wave/SharpenedWaveFunction.java @@ -56,12 +56,6 @@ public class SharpenedWaveFunction extends WaveFunction return (super.calculate() / Math.abs(super.calculate())) * Math.abs(Math.pow(Math.abs(super.calculate() / this.getAmplitude()), this.getForm()) * this.getAmplitude()); } - @Override - public SharpenedWaveFunction clone() - { - return (SharpenedWaveFunction) super.clone(); - } - @Override public String toString() { diff --git a/src/main/java/com/syncleus/dann/math/wave/WaveFunction.java b/src/main/java/com/syncleus/dann/math/wave/WaveFunction.java index 7a29109a0e7e7b3b0a491c2a2f59defdd53aeeb5..d5026e44c5b771f04370dab05c95ec3d9c6eb763 100644 --- a/src/main/java/com/syncleus/dann/math/wave/WaveFunction.java +++ b/src/main/java/com/syncleus/dann/math/wave/WaveFunction.java @@ -85,12 +85,6 @@ public class WaveFunction extends AbstractFunction return Math.sin((this.getX() + (this.getPhase() / 360)) * 2 * Math.PI * this.getFrequency()) * this.getAmplitude(); } - @Override - public WaveFunction clone() - { - return (WaveFunction) super.clone(); - } - @Override public String toString() { diff --git a/src/main/java/com/syncleus/dann/math/wave/WaveMultidimensionalFunction.java b/src/main/java/com/syncleus/dann/math/wave/WaveMultidimensionalFunction.java index a30618aa9d0aaa6607ab12fc0b90886ede126d2e..7c57619304a1d4eea40ae5c9cb7e2ddcbffb988f 100644 --- a/src/main/java/com/syncleus/dann/math/wave/WaveMultidimensionalFunction.java +++ b/src/main/java/com/syncleus/dann/math/wave/WaveMultidimensionalFunction.java @@ -171,11 +171,11 @@ public class WaveMultidimensionalFunction extends AbstractFunction } @Override - public WaveMultidimensionalFunction clone() + public Object clone() { final WaveMultidimensionalFunction copy = (WaveMultidimensionalFunction) super.clone(); - copy.wave = this.wave.clone(); + copy.wave = (SharpenedWaveletFunction) this.wave.clone(); copy.dimensionNames = this.dimensionNames.clone(); return copy; diff --git a/src/main/java/com/syncleus/dann/math/wave/wavelet/CombinedWaveletFunction.java b/src/main/java/com/syncleus/dann/math/wave/wavelet/CombinedWaveletFunction.java index e1210a10c3a75b5760897c0d49191688417976bd..78c9e2c607855fbfe0a04359df3250041a46f558 100644 --- a/src/main/java/com/syncleus/dann/math/wave/wavelet/CombinedWaveletFunction.java +++ b/src/main/java/com/syncleus/dann/math/wave/wavelet/CombinedWaveletFunction.java @@ -79,7 +79,7 @@ public class CombinedWaveletFunction extends AbstractFunction } @Override - public CombinedWaveletFunction clone() + public Object clone() { final CombinedWaveletFunction copy = (CombinedWaveletFunction) super.clone(); copy.dimensions = new TreeSet<String>(this.dimensions); diff --git a/src/main/java/com/syncleus/dann/math/wave/wavelet/SharpenedWaveletFunction.java b/src/main/java/com/syncleus/dann/math/wave/wavelet/SharpenedWaveletFunction.java index adec82d9728c4c40fa5c5c74314de3b746b7fa9e..8ffc1eedc7e263cac87503ba59cfe59875df0321 100644 --- a/src/main/java/com/syncleus/dann/math/wave/wavelet/SharpenedWaveletFunction.java +++ b/src/main/java/com/syncleus/dann/math/wave/wavelet/SharpenedWaveletFunction.java @@ -90,12 +90,6 @@ public class SharpenedWaveletFunction extends SharpenedWaveFunction return super.calculate() * this.calculateDistribution(); } - @Override - public SharpenedWaveletFunction clone() - { - return (SharpenedWaveletFunction) super.clone(); - } - @Override public String toString() { diff --git a/src/main/java/com/syncleus/dann/neural/AbstractSynapse.java b/src/main/java/com/syncleus/dann/neural/AbstractSynapse.java index 29d3d757d26d6a43633e2dc14ff50e576c0a3906..ae6f134b859644597c6a07230d14ba09f3905719 100644 --- a/src/main/java/com/syncleus/dann/neural/AbstractSynapse.java +++ b/src/main/java/com/syncleus/dann/neural/AbstractSynapse.java @@ -18,7 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.neural; -import java.util.List; import java.util.Random; import com.syncleus.dann.graph.AbstractDirectedEdge; @@ -140,22 +139,4 @@ public abstract class AbstractSynapse<N extends Neuron> extends AbstractDirected { return this.input; } - - @Override - public AbstractSynapse<N> disconnect(final N node) - { - return (AbstractSynapse<N>) super.disconnect(node); - } - - @Override - public AbstractSynapse<N> disconnect(final List<N> nodes) - { - return (AbstractSynapse<N>) super.disconnect(nodes); - } - - @Override - public AbstractSynapse<N> clone() - { - return (AbstractSynapse<N>) super.clone(); - } } diff --git a/src/main/java/com/syncleus/dann/neural/SimpleSynapse.java b/src/main/java/com/syncleus/dann/neural/SimpleSynapse.java index 69b899ea60176d96be64bf1c97ee820d129dfe78..c89a5606fb2014a9044e39cc521882694e3ee79b 100644 --- a/src/main/java/com/syncleus/dann/neural/SimpleSynapse.java +++ b/src/main/java/com/syncleus/dann/neural/SimpleSynapse.java @@ -18,8 +18,6 @@ ******************************************************************************/ package com.syncleus.dann.neural; -import java.util.List; - /** * The synapse acts as a bridge between connected neurons. It is also where the * connection weights are stores and manipulated. @@ -80,22 +78,4 @@ public final class SimpleSynapse<N extends Neuron> extends AbstractSynapse<N> { super(sourceToSet, destinationToSet, allowJoiningMultipleGraphs, contextEnabled); } - - @Override - public SimpleSynapse<N> disconnect(final N node) - { - return (SimpleSynapse<N>) super.disconnect(node); - } - - @Override - public SimpleSynapse<N> disconnect(final List<N> nodes) - { - return (SimpleSynapse<N>) super.disconnect(nodes); - } - - @Override - public SimpleSynapse<N> clone() - { - return (SimpleSynapse<N>) super.clone(); - } }